A brief history of how microscopic studies led to the elucidation of the 3D architecture and macromolecular organization of higher plant thylakoids.

Microscopic studies of chloroplasts can be traced back to the year 1678 when Antonie van Leeuwenhoek reported to the Royal Society in London that he saw green globules in grass leaf cells with his single-lens microscope. Since then, microscopic studies have continued to contribute critical insights into the complex architecture of chloroplast membranes and how their structure relates to function. This review is organized into three chronological sections: During the classic light microscope period (1678-1940), the development of improved microscopes led to the identification of green grana, a colorless stroma, and a membrane envelope. More recent (1990-2020) chloroplast dynamic studies have benefited from laser confocal and 3D-structured illumination microscopy. The development of the transmission electron microscope (1940-2000) and thin sectioning techniques demonstrated that grana consist of stacks of closely appressed grana thylakoids interconnected by non-appressed stroma thylakoids. When the stroma thylakoids were shown to spiral around the grana stacks as multiple right-handed helices, it was confirmed that the membranes of a chloroplast are all interconnected. Freeze-fracture and freeze-etch methods verified the helical nature of the stroma thylakoids, while also providing precise information on how the electron transport chain and ATP synthase complexes are non-randomly distributed between grana and stroma membrane regions. The last section (2000-2020) focuses on the most recent discoveries made possible by atomic force microscopy of hydrated membranes, and electron tomography and cryo-electron tomography of cryofixed thylakoids. These investigations have provided novel insights into thylakoid architecture and plastoglobules (summarized in a new thylakoid model), while also producing molecular-scale views of grana and stroma thylakoids in which individual functional complexes can be identified.

Three-dimensional imaging of plant cuticle architecture using confocal scanning laser microscopy.

Full appreciation of the roles of the plant cuticle in numerous aspects of physiology and development requires a comprehensive understanding of its biosynthesis and deposition; however, much is still not known about cuticle structure, trafficking and assembly. To date, assessment of cuticle organization has been dominated by 2D imaging, using histochemical stains in conjunction with light and fluorescence microscopy. This strategy, while providing valuable information, has limitations because it attempts to describe a complex 3D structure in 2D. An imaging technique that could accurately resolve 3D architecture would provide valuable additions to the growing body of information on cuticle molecular biology and biochemistry. We present a novel application of 3D confocal scanning laser microscopy for visualizing the architecture, deposition patterns and micro-structure of plant cuticles, using the fluorescent stain auramine O. We demonstrate the utility of this technique by contrasting the fruit cuticle of wild-type tomato (Solanum lycopersicum cv. M82) with those of cutin-deficient mutants. We also introduce 3D cuticle modeling based on reconstruction of serial optical sections, and describe its use in identification of several previously unreported features of the tomato fruit cuticle.

Effect of the cauliflower Or transgene on carotenoid accumulation and chromoplast formation in transgenic potato tubers.

Transgenic plants have facilitated our understanding of the functional roles of genes and the metabolic processes affected in plants. Recently, the Or gene was isolated from an orange cauliflower mutant and it was shown that the Or gene could serve as a novel genetic tool to enrich carotenoid content in transgenic potato tubers. An in-depth characterization of these Or transgenic lines is presented here. It was found that the Or transgene may facilitate the identification of potential rate-limiting step(s) of the carotenoid biosynthetic pathway. The Or transgenic tubers accumulated not only increased levels of carotenoids that normally are present in the controls, but also three additional metabolite intermediates of phytoene, phytofluene, and zeta-carotene, indicating that the desaturation steps became limiting following the expression of the Or transgene. Moreover, we observed that long-term cold storage greatly enhanced carotenoid content in the Or transgenic tubers to a level of 10-fold over controls. Expression of the Or transgene in the transgenic plants caused no dramatic changes in the transcript levels of the endogenous carotenoid biosynthetic genes, which is in agreement with the Or gene not directly controlling carotenoid biosynthesis. Microscope analysis revealed that the Or transgene conferred the formation of chromoplasts containing carotenoid sequestering structures in a heterologous system. Such structures were not observed in tubers of potato cultivars that accumulate high levels of carotenoids. Collectively, these results provide direct evidence demonstrating that the Or gene indeed controls chromoplast differentiation and that regulation of chromoplast formation can have a profound effect on carotenoid accumulation in plants.

The cauliflower Or gene encodes a DnaJ cysteine-rich domain-containing protein that mediates high levels of beta-carotene accumulation.

Despite recent progress in our understanding of carotenogenesis in plants, the mechanisms that govern overall carotenoid accumulation remain largely unknown. The Orange (Or) gene mutation in cauliflower (Brassica oleracea var botrytis) confers the accumulation of high levels of beta-carotene in various tissues normally devoid of carotenoids. Using positional cloning, we isolated the gene representing Or and verified it by functional complementation in wild-type cauliflower. Or encodes a plastid-associated protein containing a DnaJ Cys-rich domain. The Or gene mutation is due to the insertion of a long terminal repeat retrotransposon in the Or allele. Or appears to be plant specific and is highly conserved among divergent plant species. Analyses of the gene, the gene product, and the cytological effects of the Or transgene suggest that the functional role of Or is associated with a cellular process that triggers the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Moreover, we demonstrate that Or can be used as a novel genetic tool to induce carotenoid accumulation in a major staple food crop. We show here that controlling the formation of chromoplasts is an important mechanism by which carotenoid accumulation is regulated in plants.

On the occurrence of adventitious branch roots on root axes of trees.

Based on positive results for 11 of 17 species included in an anatomical survey of tree roots, we concluded that the origin of adventitious branch roots (ABR) on established, undisturbed woody parental root axes is a widespread occurrence. ABR were morphologically indistinguishable from branch roots formed in primary tissues of a parental axis, and they occurred without increase in branch root density. We concluded that ABR are an unrecognized component of undamaged root systems. Using continuous serial sectioning to perform a census of branch roots within parental root axes, we obtained definitive evidence that ABR participate in root turnover. Comparisons of older and younger axes, and the chronology of root formation in older axes fulfilled the expectation that with greater age of parental axis, ABR become increasingly predominant among intact branch roots. We confirmed this trend for one of the species scoring negative in the survey, which means that our survey results were probably influenced by age variation. Thus, any of the six negative results obtained in the survey may have been dependent on the young age and slenderness of the axes that were available for examination in those six species.

Biomechanics and anatomy of Lycopersicon esculentum fruit peels and enzyme-treated samples.

We report the biomechanics and anatomy of fruit wall peels (before and after cellulase/pectinase treatment) from two Lycopersicon esculentum cultivars (i.e., Inbred 10 and Sweet 100 cherry tomatoes). Samples were tested before and after enzyme treatment in uniaxial tension to determine their rate of creep, plastic and instantaneous elastic strains, breaking stress (strength), and work of fracture. The fruit peels of both cultivars exhibited pronounced viscoelastic and strain-hardening behavior, but differed significantly in their rheological behavior and magnitudes of material properties, e.g., Inbred 10 peels crept less rapidly and accumulated more plastic strains (but less rapidly), were stiffer and stronger, and had a larger work of fracture than Sweet 100 peels. The cuticular membrane (CM) also differed; e.g., Sweet 100 CM strain-softened at forces that caused Inbred 10 to strain-harden. The mechanical behavior of peels and their CM correlated with anatomical differences. The Inbred 10 CM develops in subepidermal cell layers, whereas the Sweet 100 CM is poorly developed below the epidermis. Based on these and other observations, we posit that strain-hardening involves the realignment of CM fibrillar elements and that this phenomenon is less pronounced for Sweet 100 because fewer cell walls contribute to its CM compared to Inbred 10.

On the mechanical properties of the rare endemic cactus Stenocereus eruca and the related species S. gummosus.

We examined the hypothesis that the procumbent growth habit of the rare, columnar cactus Stenocereus eruca is in part the result of a diminution of the mechanical properties of stem tissues by comparing the properties of S. eruca plants with those of the putatively closely related semi-erect shrub S. gummosus. Intact stems and surgically removed anatomically comparable regions of the stems of both species were tested in bending and tension to determine their Young's modulus and breaking stress. A computer program was used to evaluate the contribution of each region to the capacity of entire stems to resist bending forces. Our analyses indicate that the principal stiffening agent in the stems of both species is a peripheral tissue complex (= epidermis and collenchyma in the primary plant body) that has a significantly higher tensile breaking stress and greater extensibility for S. gummosus than that of S. eruca. Computer simulations indicate that the wood of either species contributes little to bending stiffness, except in very old portions of S. gummosus stems, because of its small volume and central location in the stem. These and other observations are interpreted to support the hypothesis that S. eruca evolved a procumbent growth habit as the result of manifold developmental alterations some of which reduced the capacity of tissues to support the weight of stems.

The formation of adventitious roots on root axes is a widespread occurrence in field-grown dicotyledonous plants.

The formation of adventitious branch roots in the secondary tissues of parental root axes is a widespread and frequent occurrence under field conditions. Anatomical features diagnostic for the recognition of adventitious roots were utilized to confirm the occurrence of adventitious roots on roots of 22 species from 12 families in nine orders of dicotyledonous plants. Adventitious roots may play an important role in generating the population of fine roots as part of root turnover in the soil.

The biomechanics of Pachycereus pringlei root systems.

We report on the root system of the large columnar cactus species Pachycereus pringlei to explore the hypothesis that increasing plant size decreases the ability to resist wind-throw but increases the capacity to absorb and store nutrients in roots (i.e., plant size limits the performance of these functions and may shift the performance of one function in favor of another as size increases). Based on 18 plants differing in size, the root system is characterized by a broad and deep bayonet-like root central to a shallow and extensive lateral system of root elements bearing sinker roots near the stem base. All root types have a living secondary cortex and contain wood with a large volume fraction of ray tissues that increases toward the stem base. Wood stiffness and tensile strength are correlated negatively with the ray tissue volume fraction and thus decrease toward the stem base in lateral and bayonet roots. Calculations show that the ability of the bayonet and proximal lateral root elements to resist wind-throw decreases with increasing plant size, whereas the nutrient absorption/storage capacity of the total root system increases with plant size (i.e., a size-dependent shift between these two root functions occurs).

Axis elongation can occur with net longitudinal orientation of wall microfibrils.

During the initial phases of elongation of pea internodes, oat and rice coleoptiles, oat mesocotyls, soybean hypocotyls and dandelion peduncles, net transverse orientation of cellulose wall microfibrils (Mfs) was found in the outer epidermal wall. This paper demonstrates that in all these axes, with the exception of rice coleoptile, net longitudinal orientation of microfibrils occurs in the outer epidermal wall in portions of the axes that were still elongating at the time of sampling. The timing of the transition to net longitudinal orientation and whether the transition proceeded acropetally or basipetally varied with the type of axis under study. The variability of the relationship between extension and the transition from net transverse to net longitudinal orientation suggests that factors other than extension are important in determining the transition. Layers of longitudinal wall microfibrils may be added to the extending epidermal wall to bolster its tensile strength commensurate with its function during and after extension. Attention is drawn to the parallels between the concept of tissue tension in growing axes and the concept that the epidermis functions as a stressed skin in the support of mature plant parts in primary growth.